--- a
+++ b/src/test/java/org/sbaresearch/owl/OwlApiFacadeIntegrationTest.java
@@ -0,0 +1,122 @@
+/**
+ * Copyright (c) 2013/2014 Verein zur Foerderung der IT-Sicherheit in Oesterreich (SBA).
+ * The work has been developed in the TIMBUS Project and the above-mentioned are Members of the TIMBUS Consortium.
+ * TIMBUS is supported by the European Union under the 7th Framework Programme for research and technological
+ * development and demonstration activities (FP7/2007-2013) under grant agreement no. 269940.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with
+ * the License. You may obtain a copy of the License at: http://www.apache.org/licenses/LICENSE-2.0
+ * Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on
+ * an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied, including without
+ * limitation, any warranties or conditions of TITLE, NON-INFRINGEMENT, MERCHANTIBITLY, or FITNESS FOR A PARTICULAR
+ * PURPOSE. In no event and under no legal theory, whether in tort (including negligence), contract, or otherwise,
+ * unless required by applicable law or agreed to in writing, shall any Contributor be liable for damages, including
+ * any direct, indirect, special, incidental, or consequential damages of any character arising as a result of this
+ * License or out of the use or inability to use the Work.
+ * See the License for the specific language governing permissions and limitation under the License.
+ */
+package org.sbaresearch.owl;
+
+import com.hp.hpl.jena.query.QuerySolution;
+import com.hp.hpl.jena.rdf.model.Model;
+import junitparams.JUnitParamsRunner;
+import junitparams.Parameters;
+import org.junit.Assert;
+import org.junit.BeforeClass;
+import org.junit.Test;
+import org.junit.experimental.categories.Category;
+import org.junit.runner.RunWith;
+import org.semanticweb.owlapi.apibinding.OWLManager;
+import org.semanticweb.owlapi.model.OWLOntologyCreationException;
+import org.semanticweb.owlapi.model.OWLOntologyStorageException;
+
+import java.io.IOException;
+import java.net.URISyntaxException;
+import java.util.List;
+
+import static org.hamcrest.CoreMatchers.equalTo;
+import static org.hamcrest.collection.IsIterableContainingInOrder.contains;
+
+
+@Category(IntegrationTests.class)
+@RunWith(JUnitParamsRunner.class)
+public class OwlApiFacadeIntegrationTest {
+
+    @BeforeClass
+    public static void setUpClass() {
+        TestUtils.loadTimbusTrustStore();
+    }
+
+    @Test
+    @Parameters(
+            {"http://timbus.teco.edu/ontologies/Scenarios/MusicClassificationDSOs.owl, 39e989c6"}
+    )
+    public void testGetIndividualByUnqualifiedName_individualInImportedNamespace_shouldReturnIndividual(String url, String indivName) throws URISyntaxException, OWLOntologyCreationException, OwlElementNotFoundException {
+        OwlApiFacade owlApiFacade = createDefaultOwlApiFacade();
+        owlApiFacade.load(url);
+        Assert.assertNotNull(owlApiFacade.getIndividualByUnqualifiedName(indivName, true));
+    }
+
+    private OwlApiFacade createDefaultOwlApiFacade() {
+        return new OwlApiFacade(OWLManager.createOWLOntologyManager(), OWLManager.getOWLDataFactory());
+    }
+
+    @Test
+    public void testGetJenaModel_complexModel_shouldReturnJenaModel() throws OWLOntologyCreationException, OWLOntologyStorageException, IOException {
+        OwlApiFacade owlApi = createDefaultOwlApiFacade();
+        owlApi.load(this.getClass().getResourceAsStream("/MusicClassification.owl"));
+        Model jenaModel = owlApi.getJenaModel(false);
+        Assert.assertNotNull(jenaModel);
+        Assert.assertEquals(5256, jenaModel.size());
+    }
+
+    @Test
+    public void testGetJenaModel_withImports_shouldReturnJenaModelContainingImportedIndivs() throws OWLOntologyCreationException, OWLOntologyStorageException, IOException {
+        OwlApiFacade owlApi = createDefaultOwlApiFacade();
+        owlApi.load(this.getClass().getResourceAsStream("/MusicClassification.owl"));
+        Model jenaModel = owlApi.getJenaModel(false);
+        JenaQueryFacade jenaQueryFacade = new JenaQueryFacade(jenaModel);
+        List<String> tools = JenaQueryFacade.extractColumn(jenaQueryFacade.query("" +
+                "PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>\n" +
+                "SELECT ?tool\n" +
+                "WHERE{\n" +
+                "    ?tool rdfs:label ?label .\n" +
+                "    FILTER(str(?label) = \"Base64_Encoder\") .\n" +
+                "}"), "tool");
+        Assert.assertThat(tools, contains("http://timbus.teco.edu/ontologies/Scenarios/MusicClassification.owl#39e989c6"));
+    }
+
+    @Test
+    @Parameters({"http://id.loc.gov/vocabulary/preservation/inhibitorTarget"})
+    public void testLoad_invalidDocumentIRI_shouldAddValidIRIToOntology(String url) throws OWLOntologyCreationException {
+        OwlApiFacade owlApi = createDefaultOwlApiFacade();
+        owlApi.load(url);
+        Assert.assertThat(owlApi.getOntology().getOntologyID().getOntologyIRI().toString(), equalTo(url));
+    }
+
+
+    @Test
+    public void testGetJenaModel_queryImportedIndivs_shouldReturnJenaModelContainingImportedIndivs() throws OWLOntologyCreationException, OWLOntologyStorageException, IOException {
+        OwlApiFacade owlApi = createDefaultOwlApiFacade();
+        owlApi.load(this.getClass().getResourceAsStream("/MusicClassificationDSOs.owl"));
+        Model jenaModel = owlApi.getJenaModel(false);
+        JenaQueryFacade jenaQueryFacade = new JenaQueryFacade(jenaModel);
+        List<QuerySolution> results = jenaQueryFacade.query("" +
+                "PREFIX dio: <http://timbus.teco.edu/ontologies/DIO.owl#>\n" +
+                "PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>\n" +
+                "SELECT ?tool ?readFormat ?writeFormat ?label\n" +
+                "WHERE{\n" +
+                "    ?tool a dio:SystemSoftware .\n" +
+                "    ?tool rdfs:label ?label .\n" +
+                "    FILTER(str(?label) = \"Base64_Encoder\") .\n" +
+                "    OPTIONAL {\n" +
+                "        ?tool dio:hasAccessTypeRead ?readFormat .\n" +
+                "    }\n" +
+                "    OPTIONAL {\n" +
+                "        ?tool dio:hasAccessTypeWrite ?writeFormat .\n" +
+                "    }\n" +
+                "}");
+        List<String> tools = JenaQueryFacade.extractColumn(results, "tool");
+        Assert.assertThat(tools, contains("http://timbus.teco.edu/ontologies/Scenarios/MusicClassification.owl#39e989c6"));
+    }
+}